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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850295.1_cds_XP_016511107.1_23881
CDS Infomation

[gene=LOC107828335] [db_xref=GeneID:107828335] [protein=heparanase-like protein 3] [protein_id=XP_016511107.1] [location=complement(join(13946..14317,14404..14503,14864..14989,15086..15275,15367..15597,16057..16205,16306..16489,16715..16751,18000..18227))] [gbkey=CDS]
Sequence

ATGGGTTCTTTATTTTTGCAAAAGGGAATGTTGGTGTGGATTTGTTTGTTTAGTTTGAGA
TTAGTTTGTGGGTACTCAGAGGTTGCTCAAGGTAGTGTGTTTATAGATGGGAAGAATGCC
ATTGGAAGAACAGACAATAATTTCATTTGTGCTACTTTGGATTGGTGGCCACCTGAGAAA
TGTGATTATGGAACTTGTGCTTGGGACCATGCTTCTTTCCTTAATCTGGATCTTAACAAC
ATTATTTTTCTCAATGCAATAAAAGCCTTCTCGCCATTAAAGATTCGGTTAGGAGGCACT
TTACAAGACAAAGTCATATACGAAACTGAAGATCATAAACAGCCCTGTGTTTCATTTGTT
AAAAACACATCAGAGATGTTTGGTTTTACTCCAGGGTGCCTTCCCTTATCTAGATGGGAT
GAACTCAATGCATTCTTTAATAAATCCGGGGCTAGCATAATTTTTGGATTGAATGCTCTC
TATGGAAGATCTGTACACCCTGACGGTTTATCTGTCGGAGCTTGGGATTCAAGCAATGCT
GAATCGCTTATACGTTATACTGTCAAAAAAGGATACGCTATCCACGGTTGGGAGCTTGGG
AATGAATTGTGTGGAAGTGGAGTTGGAACCAGAGTTGCAGCAGATCAATATGCATCTGAT
ACTACTGCCTTGTACAAAATAGTACTAGATGCTTACAAGAATTTTGAACCTAGGCCTCTG
GTCATTGCGCCAGGAGGTTTCTTCGACGAAGGCTGGTTTAGGGAATTAATAAATAAAACT
GGGAAATCATTTGATGTGGCTACTCACCACATATATAACCTTGGTCCAGGAAGAGATGAA
CACCTAGTTGATAAAATCCTCGATCCATCTTATCTCGATGGTGAGGCCGACACATTTAGC
AAACTTCAGAATGTACTCAAGACGTCTGGTACTTCAGTGGTTGCTTGGGTTGGTGAGGCT
GGAGGGGCTTACAACAGCGGTCGCGACCATGTCACAAATGCCTTTGTTTTTAGCTTCTGG
TATTTGGACCAGCTTGGGATGTCAGCTGCTTATGATACTAAAGCATACTGTCGACAGACA
CTGATTGGTGGAAACTATGGTTTACTCAACACCACTACCTTTGTACCCAATCCAGATTAC
TACAGTGCTCTTCTTTGGCACCGATTAATGGGAAGGAACGTTTTGTCAACAACTTTCTCA
GGATCAAAGAAAATACGTGCCTACGCACATTGTGCAAAGCAATCTCGAGGTATCACCTTA
TTGTTGATCAATCTTGACGGCAACACTACCATGAGTGCCAACGTTGCTTTTAACGGTACT
ATGTTGCATCAAAGAAAGCACAGACATCATAGCCACAGAAAGAGTTCTTCAATTAGACTG
CCTAAAAGTAGAAAGATAGCATCAAATACAAGACAAGAATACCATTTAACAGCAAAAGAT
GGAGATTTACAGAGCCAGACTATGCTGCTGAATGGGAAACCACTAACTATAGATTCATTT
GGAAATATACCATCATTGGAGCCTATATTTGTCAATTCAACAGAGCCATTAACAGTGGCT
CCATTCTCTATTGTATTTGTACACATACCATATGTTATTTTGCCTGCTTGTAGCTGA

Peptide Sequence

PEP ID

XP_016511107.1
PEP Infomation

PREDICTED: heparanase-like protein 3 [Nicotiana tabacum]
Sequence

MGSLFLQKGMLVWICLFSLRLVCGYSEVAQGSVFIDGKNAIGRTDNNFICATLDWWPPEK
CDYGTCAWDHASFLNLDLNNIIFLNAIKAFSPLKIRLGGTLQDKVIYETEDHKQPCVSFV
KNTSEMFGFTPGCLPLSRWDELNAFFNKSGASIIFGLNALYGRSVHPDGLSVGAWDSSNA
ESLIRYTVKKGYAIHGWELGNELCGSGVGTRVAADQYASDTTALYKIVLDAYKNFEPRPL
VIAPGGFFDEGWFRELINKTGKSFDVATHHIYNLGPGRDEHLVDKILDPSYLDGEADTFS
KLQNVLKTSGTSVVAWVGEAGGAYNSGRDHVTNAFVFSFWYLDQLGMSAAYDTKAYCRQT
LIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTTFSGSKKIRAYAHCAKQSRGITL
LLINLDGNTTMSANVAFNGTMLHQRKHRHHSHRKSSSIRLPKSRKIASNTRQEYHLTAKD
GDLQSQTMLLNGKPLTIDSFGNIPSLEPIFVNSTEPLTVAPFSIVFVHIPYVILPACS

Transcript Sequence

Gene sequence data has not been registered.